IFM Analyser

IFM Analyser is written in Mathworks MATLAB for dealing with the quantification of sarcomeric structures using pre defined templates (single line, double line, gap) in drosophila flight muscles.

Requirements:

  • Mathworks Matlab R2018b or newer
  • Curve Fitting Toolbox – for quantifying double lines

ROIAnalysisTool v1.0 (2018. Aug): internal development branch

IFM Analyser v2.0 (2019. May): Initial stable release

IFM Analyser v2.0 (2020. April): GNU Octave edition (it can only run in non-gui mode.)

IFM Analyser v2.1 (2020. May): planned release

  • Source code (GPLv3): v2.1 zip archive
  • MATLAB App package: v2.1
  • User Guide: ifm-user-guide-v2.1
    • NEW: GNU Octave compatibility for non-gui mode
    • NEW: csv import & import data filter
    • Changed: more visible
    • NEW: crop, export individual figures on merge tab
    • Changed: mergeData struct format in concatenated_xydata.mat
    • NEW: IFMSizeandDesnity.mlapp to estimate diameter and calculate plots.
    • NEW: IFMEval.mlapp to post evaluate an analysis.

IFM Analyser latest development version avaliable only as source code.

  • Source code: GitLab Repository or ZIP Archive
  • License: GPLv3
  • Contributing: Pull requests are welcome. For major changes, please open an issue first to discuss what you would like to change. Please make sure to provide a demo dataset.